Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.52■□□□□ 0.56
BEST1O76090 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.52■□□□□ 0.56
BEST1O76090 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
BEST1O76090 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.52■□□□□ 0.56
BEST1O76090 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
BEST1O76090 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
BEST1O76090 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.52■□□□□ 0.56
BEST1O76090 SPDYE21P-201ENST00000413323 827 ntBASIC18.52■□□□□ 0.56
BEST1O76090 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.52■□□□□ 0.56
BEST1O76090 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
BEST1O76090 RNPS1P1-201ENST00000507437 918 ntBASIC18.52■□□□□ 0.56
BEST1O76090 RNA5SP419-201ENST00000515908 135 ntBASIC18.52■□□□□ 0.56
BEST1O76090 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.52■□□□□ 0.56
BEST1O76090 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.52■□□□□ 0.56
BEST1O76090 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.52■□□□□ 0.56
BEST1O76090 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BEST1O76090 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
BEST1O76090 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BEST1O76090 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BEST1O76090 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BEST1O76090 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BEST1O76090 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
BEST1O76090 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.51■□□□□ 0.55
BEST1O76090 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
BEST1O76090 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.51■□□□□ 0.55
BEST1O76090 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.51■□□□□ 0.55
BEST1O76090 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
BEST1O76090 AC018712.1-201ENST00000455767 687 ntBASIC18.51■□□□□ 0.55
BEST1O76090 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BEST1O76090 AC002558.1-201ENST00000488906 803 ntBASIC18.51■□□□□ 0.55
BEST1O76090 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.51■□□□□ 0.55
BEST1O76090 STK25P1-201ENST00000585406 838 ntBASIC18.51■□□□□ 0.55
BEST1O76090 AC073592.4-201ENST00000623827 446 ntBASIC18.51■□□□□ 0.55
BEST1O76090 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
BEST1O76090 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
BEST1O76090 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
BEST1O76090 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST1O76090 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 HLA-A-201ENST00000376802 1334 ntBASIC18.5■□□□□ 0.55
BEST1O76090 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
BEST1O76090 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BEST1O76090 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 KRT18P67-201ENST00000432816 1264 ntBASIC18.5■□□□□ 0.55
BEST1O76090 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.5■□□□□ 0.55
BEST1O76090 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.5■□□□□ 0.55
BEST1O76090 AC025062.2-201ENST00000605477 670 ntBASIC18.5■□□□□ 0.55
BEST1O76090 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
BEST1O76090 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST1O76090 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.5■□□□□ 0.55
BEST1O76090 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms