Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 AC008687.5-201ENST00000593746 558 ntBASIC20.23■□□□□ 0.83
GADD45BO75293 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.23■□□□□ 0.83
GADD45BO75293 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GADD45BO75293 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.23■□□□□ 0.83
GADD45BO75293 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
GADD45BO75293 AC010947.1-201ENST00000623454 693 ntBASIC20.23■□□□□ 0.83
GADD45BO75293 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.23■□□□□ 0.83
GADD45BO75293 AC092865.7-201ENST00000641832 219 ntBASIC20.23■□□□□ 0.83
GADD45BO75293 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GADD45BO75293 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
GADD45BO75293 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GADD45BO75293 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GADD45BO75293 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GADD45BO75293 AC092053.1-201ENST00000605787 1936 ntBASIC20.23■□□□□ 0.83
GADD45BO75293 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.23■□□□□ 0.83
GADD45BO75293 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
GADD45BO75293 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GADD45BO75293 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.23■□□□□ 0.83
GADD45BO75293 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GADD45BO75293 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GADD45BO75293 HCG11-201ENST00000411553 5696 ntBASIC20.22■□□□□ 0.83
GADD45BO75293 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.22■□□□□ 0.83
GADD45BO75293 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.22■□□□□ 0.83
GADD45BO75293 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 AC079328.2-201ENST00000561241 3354 ntBASIC20.22■□□□□ 0.83
GADD45BO75293 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 AC016396.2-201ENST00000562575 1417 ntBASIC20.22■□□□□ 0.83
GADD45BO75293 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.22■□□□□ 0.83
GADD45BO75293 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GADD45BO75293 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.22■□□□□ 0.83
GADD45BO75293 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 SLC25A1P3-201ENST00000395415 828 ntBASIC20.22■□□□□ 0.83
GADD45BO75293 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.22■□□□□ 0.83
GADD45BO75293 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.22■□□□□ 0.83
GADD45BO75293 FAM87A-204ENST00000613235 858 ntBASIC20.22■□□□□ 0.83
GADD45BO75293 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.22■□□□□ 0.83
GADD45BO75293 AC092171.3-201ENST00000610122 2651 ntBASIC20.22■□□□□ 0.83
GADD45BO75293 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GADD45BO75293 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.21■□□□□ 0.83
GADD45BO75293 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.21■□□□□ 0.83
GADD45BO75293 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 ECEL1P2-202ENST00000465689 757 ntBASIC20.21■□□□□ 0.83
GADD45BO75293 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
GADD45BO75293 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GADD45BO75293 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.21■□□□□ 0.83
GADD45BO75293 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.21■□□□□ 0.83
GADD45BO75293 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
GADD45BO75293 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GADD45BO75293 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GADD45BO75293 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
GADD45BO75293 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.2■□□□□ 0.82
GADD45BO75293 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
GADD45BO75293 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GADD45BO75293 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.2■□□□□ 0.82
GADD45BO75293 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.2■□□□□ 0.82
GADD45BO75293 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.2■□□□□ 0.82
GADD45BO75293 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.2■□□□□ 0.82
GADD45BO75293 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.2■□□□□ 0.82
GADD45BO75293 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.2■□□□□ 0.82
GADD45BO75293 MIR4785-201ENST00000585005 73 ntBASIC20.2■□□□□ 0.82
GADD45BO75293 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.2■□□□□ 0.82
GADD45BO75293 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
GADD45BO75293 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GADD45BO75293 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GADD45BO75293 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.2■□□□□ 0.82
GADD45BO75293 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms