Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT3O75175 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT3O75175 AC009102.3-201ENST00000623118 1491 ntBASIC17.18■□□□□ 0.34
CNOT3O75175 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT3O75175 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT3O75175 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CNOT3O75175 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT3O75175 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 NUS1P1-201ENST00000446295 882 ntBASIC17.18■□□□□ 0.34
CNOT3O75175 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 AC091607.1-201ENST00000490318 1060 ntBASIC17.18■□□□□ 0.34
CNOT3O75175 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.18■□□□□ 0.34
CNOT3O75175 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT3O75175 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT3O75175 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CNOT3O75175 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CNOT3O75175 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT3O75175 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CNOT3O75175 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CNOT3O75175 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT3O75175 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CNOT3O75175 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CNOT3O75175 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CNOT3O75175 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CNOT3O75175 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT3O75175 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.17■□□□□ 0.34
CNOT3O75175 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT3O75175 AL845331.1-201ENST00000424978 1190 ntBASIC17.17■□□□□ 0.34
CNOT3O75175 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CNOT3O75175 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 AC112777.1-201ENST00000540175 1423 ntBASIC17.17■□□□□ 0.34
CNOT3O75175 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.17■□□□□ 0.34
CNOT3O75175 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.17■□□□□ 0.34
CNOT3O75175 AP005901.3-202ENST00000581653 237 ntBASIC17.17■□□□□ 0.34
CNOT3O75175 AL732292.2-201ENST00000609649 430 ntBASIC17.17■□□□□ 0.34
CNOT3O75175 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT3O75175 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 AC124864.1-201ENST00000623408 392 ntBASIC17.17■□□□□ 0.34
CNOT3O75175 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CNOT3O75175 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT3O75175 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CNOT3O75175 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT3O75175 AC073592.3-201ENST00000625118 1834 ntBASIC17.17■□□□□ 0.34
CNOT3O75175 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 AC233702.3-201ENST00000578656 1387 ntBASIC17.16■□□□□ 0.34
CNOT3O75175 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT3O75175 AL024508.2-201ENST00000607749 1894 ntBASIC17.16■□□□□ 0.34
CNOT3O75175 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT3O75175 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT3O75175 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
CNOT3O75175 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT3O75175 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNOT3O75175 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.16■□□□□ 0.34
CNOT3O75175 AC012615.1-201ENST00000565797 1299 ntBASIC17.16■□□□□ 0.34
CNOT3O75175 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.16■□□□□ 0.34
CNOT3O75175 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT3O75175 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.16■□□□□ 0.34
CNOT3O75175 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNOT3O75175 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT3O75175 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CNOT3O75175 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms