Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SSSCA1O60232 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SSSCA1O60232 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 AC008741.2-201ENST00000612792 3115 ntBASIC14.45□□□□□ -0.1
SSSCA1O60232 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.45□□□□□ -0.1
SSSCA1O60232 AC060834.1-201ENST00000443027 2032 ntBASIC14.45□□□□□ -0.1
SSSCA1O60232 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.45□□□□□ -0.1
SSSCA1O60232 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SSSCA1O60232 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SSSCA1O60232 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.45□□□□□ -0.1
SSSCA1O60232 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.45□□□□□ -0.1
SSSCA1O60232 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.45□□□□□ -0.1
SSSCA1O60232 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SSSCA1O60232 AC142086.2-201ENST00000569753 217 ntBASIC14.45□□□□□ -0.1
SSSCA1O60232 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SSSCA1O60232 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
SSSCA1O60232 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SSSCA1O60232 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.45□□□□□ -0.1
SSSCA1O60232 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SSSCA1O60232 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
SSSCA1O60232 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.44□□□□□ -0.1
SSSCA1O60232 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SSSCA1O60232 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.44□□□□□ -0.1
SSSCA1O60232 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.44□□□□□ -0.1
SSSCA1O60232 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 KRT8P7-201ENST00000533003 1432 ntBASIC14.44□□□□□ -0.1
SSSCA1O60232 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SSSCA1O60232 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.44□□□□□ -0.1
SSSCA1O60232 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.44□□□□□ -0.1
SSSCA1O60232 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SSSCA1O60232 MFAP1P1-201ENST00000442257 1255 ntBASIC14.44□□□□□ -0.1
SSSCA1O60232 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 MIR4674-201ENST00000582457 87 ntBASIC14.44□□□□□ -0.1
SSSCA1O60232 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.44□□□□□ -0.1
SSSCA1O60232 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.44□□□□□ -0.1
SSSCA1O60232 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SSSCA1O60232 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SSSCA1O60232 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.44□□□□□ -0.1
SSSCA1O60232 AC096733.2-201ENST00000609937 1394 ntBASIC14.44□□□□□ -0.1
SSSCA1O60232 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SSSCA1O60232 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.44□□□□□ -0.1
SSSCA1O60232 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
SSSCA1O60232 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
SSSCA1O60232 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 FSCN1P1-201ENST00000568912 1481 ntBASIC14.44□□□□□ -0.1
SSSCA1O60232 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SSSCA1O60232 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SSSCA1O60232 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SSSCA1O60232 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.43□□□□□ -0.1
SSSCA1O60232 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.43□□□□□ -0.1
SSSCA1O60232 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SSSCA1O60232 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSSCA1O60232 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.43□□□□□ -0.1
SSSCA1O60232 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SSSCA1O60232 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.43□□□□□ -0.1
SSSCA1O60232 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.43□□□□□ -0.1
SSSCA1O60232 SLC25A1P4-201ENST00000567977 778 ntBASIC14.43□□□□□ -0.1
SSSCA1O60232 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SSSCA1O60232 LINC01451-201ENST00000623792 534 ntBASIC14.43□□□□□ -0.1
SSSCA1O60232 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SSSCA1O60232 FLJ38576-201ENST00000623820 2459 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms