Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.28■□□□□ 0.36
PEX1O43933 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
PEX1O43933 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.28■□□□□ 0.36
PEX1O43933 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 CICP6-201ENST00000457191 2729 ntBASIC17.28■□□□□ 0.36
PEX1O43933 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.28■□□□□ 0.36
PEX1O43933 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PEX1O43933 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PEX1O43933 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
PEX1O43933 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PEX1O43933 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.27■□□□□ 0.36
PEX1O43933 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
PEX1O43933 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
PEX1O43933 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PEX1O43933 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 KRT8P32-201ENST00000512863 1461 ntBASIC17.27■□□□□ 0.36
PEX1O43933 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PEX1O43933 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.27■□□□□ 0.36
PEX1O43933 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 AP000523.1-201ENST00000398242 1049 ntBASIC17.27■□□□□ 0.36
PEX1O43933 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PEX1O43933 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.27■□□□□ 0.36
PEX1O43933 MIR4674-201ENST00000582457 87 ntBASIC17.27■□□□□ 0.36
PEX1O43933 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PEX1O43933 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PEX1O43933 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PEX1O43933 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PEX1O43933 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PEX1O43933 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.27■□□□□ 0.35
PEX1O43933 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PEX1O43933 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PEX1O43933 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PEX1O43933 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
PEX1O43933 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PEX1O43933 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PEX1O43933 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.27■□□□□ 0.35
PEX1O43933 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PEX1O43933 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PEX1O43933 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.26■□□□□ 0.35
PEX1O43933 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PEX1O43933 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.26■□□□□ 0.35
PEX1O43933 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PEX1O43933 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PEX1O43933 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.26■□□□□ 0.35
PEX1O43933 AC009947.2-201ENST00000444014 672 ntBASIC17.26■□□□□ 0.35
PEX1O43933 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.26■□□□□ 0.35
PEX1O43933 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.26■□□□□ 0.35
PEX1O43933 AL441883.1-201ENST00000566170 1045 ntBASIC17.26■□□□□ 0.35
PEX1O43933 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.26■□□□□ 0.35
PEX1O43933 AC008622.2-201ENST00000617006 1229 ntBASIC17.26■□□□□ 0.35
PEX1O43933 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PEX1O43933 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PEX1O43933 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.26■□□□□ 0.35
PEX1O43933 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.26■□□□□ 0.35
PEX1O43933 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.26■□□□□ 0.35
PEX1O43933 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms