Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A2O43868 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC28A2O43868 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A2O43868 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A2O43868 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A2O43868 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A2O43868 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC28A2O43868 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC28A2O43868 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC28A2O43868 AL157888.1-201ENST00000631930 593 ntBASIC17.06■□□□□ 0.32
SLC28A2O43868 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A2O43868 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC28A2O43868 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SLC28A2O43868 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC28A2O43868 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A2O43868 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A2O43868 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC28A2O43868 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC28A2O43868 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC28A2O43868 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC28A2O43868 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC28A2O43868 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC28A2O43868 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC28A2O43868 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC28A2O43868 SLC25A6P5-201ENST00000435663 894 ntBASIC17.05■□□□□ 0.32
SLC28A2O43868 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.05■□□□□ 0.32
SLC28A2O43868 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC28A2O43868 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.05■□□□□ 0.32
SLC28A2O43868 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SLC28A2O43868 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC28A2O43868 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC28A2O43868 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC28A2O43868 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC28A2O43868 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC28A2O43868 AC134043.2-201ENST00000624206 2238 ntBASIC17.05■□□□□ 0.32
SLC28A2O43868 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 GNAS-203ENST00000306120 1878 ntBASIC17.05■□□□□ 0.32
SLC28A2O43868 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC28A2O43868 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
SLC28A2O43868 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC28A2O43868 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC28A2O43868 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC28A2O43868 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLC28A2O43868 AC243591.1-201ENST00000452967 1364 ntBASIC17.04■□□□□ 0.32
SLC28A2O43868 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC28A2O43868 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC28A2O43868 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC28A2O43868 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC28A2O43868 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SLC28A2O43868 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.04■□□□□ 0.32
SLC28A2O43868 AP001160.2-201ENST00000596071 487 ntBASIC17.04■□□□□ 0.32
SLC28A2O43868 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 AC079781.4-201ENST00000641908 219 ntBASIC17.04■□□□□ 0.32
SLC28A2O43868 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC28A2O43868 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC28A2O43868 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 LTB4R2-202ENST00000528054 3092 ntBASIC17.04■□□□□ 0.32
SLC28A2O43868 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SLC28A2O43868 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLC28A2O43868 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC28A2O43868 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC28A2O43868 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC28A2O43868 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC28A2O43868 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC28A2O43868 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms