Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.82■□□□□ 0.76
ACTN4O43707 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ACTN4O43707 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.82■□□□□ 0.76
ACTN4O43707 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.82■□□□□ 0.76
ACTN4O43707 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.82■□□□□ 0.76
ACTN4O43707 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.82■□□□□ 0.76
ACTN4O43707 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ACTN4O43707 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ACTN4O43707 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ACTN4O43707 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTN4O43707 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ACTN4O43707 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ACTN4O43707 AC097374.2-201ENST00000618617 1306 ntBASIC19.81■□□□□ 0.76
ACTN4O43707 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.81■□□□□ 0.76
ACTN4O43707 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ACTN4O43707 AL645929.1-201ENST00000420084 975 ntBASIC19.81■□□□□ 0.76
ACTN4O43707 AL845331.1-201ENST00000424978 1190 ntBASIC19.81■□□□□ 0.76
ACTN4O43707 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.81■□□□□ 0.76
ACTN4O43707 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.81■□□□□ 0.76
ACTN4O43707 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.81■□□□□ 0.76
ACTN4O43707 RN7SL606P-201ENST00000472779 293 ntBASIC19.81■□□□□ 0.76
ACTN4O43707 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
ACTN4O43707 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.81■□□□□ 0.76
ACTN4O43707 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ACTN4O43707 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.81■□□□□ 0.76
ACTN4O43707 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.81■□□□□ 0.76
ACTN4O43707 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ACTN4O43707 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.8■□□□□ 0.76
ACTN4O43707 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN4O43707 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN4O43707 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ACTN4O43707 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN4O43707 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN4O43707 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.8■□□□□ 0.76
ACTN4O43707 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.8■□□□□ 0.76
ACTN4O43707 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ACTN4O43707 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ACTN4O43707 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN4O43707 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.8■□□□□ 0.76
ACTN4O43707 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.8■□□□□ 0.76
ACTN4O43707 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.8■□□□□ 0.76
ACTN4O43707 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.8■□□□□ 0.76
ACTN4O43707 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
ACTN4O43707 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ACTN4O43707 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.79■□□□□ 0.76
ACTN4O43707 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 AD000864.1-201ENST00000624076 2295 ntBASIC19.79■□□□□ 0.76
ACTN4O43707 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.79■□□□□ 0.76
ACTN4O43707 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
ACTN4O43707 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ACTN4O43707 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ACTN4O43707 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms