Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AC006538.3-201ENST00000612495 578 ntBASIC21.2■□□□□ 0.98
SEMA3EO15041 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.2■□□□□ 0.98
SEMA3EO15041 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.2■□□□□ 0.98
SEMA3EO15041 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.2■□□□□ 0.98
SEMA3EO15041 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SEMA3EO15041 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SEMA3EO15041 REXO1L11P-201ENST00000620964 1927 ntBASIC21.19■□□□□ 0.98
SEMA3EO15041 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SEMA3EO15041 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SEMA3EO15041 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
SEMA3EO15041 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SEMA3EO15041 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.19■□□□□ 0.98
SEMA3EO15041 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.19■□□□□ 0.98
SEMA3EO15041 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.19■□□□□ 0.98
SEMA3EO15041 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.19■□□□□ 0.98
SEMA3EO15041 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SEMA3EO15041 MIR940-201ENST00000401276 94 ntBASIC21.19■□□□□ 0.98
SEMA3EO15041 AC108751.1-201ENST00000490852 363 ntBASIC21.19■□□□□ 0.98
SEMA3EO15041 AL353135.1-201ENST00000606729 504 ntBASIC21.19■□□□□ 0.98
SEMA3EO15041 LINC01451-201ENST00000623792 534 ntBASIC21.19■□□□□ 0.98
SEMA3EO15041 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SEMA3EO15041 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SEMA3EO15041 AL354751.1-201ENST00000412768 1863 ntBASIC21.19■□□□□ 0.98
SEMA3EO15041 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.19■□□□□ 0.98
SEMA3EO15041 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.19■□□□□ 0.98
SEMA3EO15041 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SEMA3EO15041 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.18■□□□□ 0.98
SEMA3EO15041 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SEMA3EO15041 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.18■□□□□ 0.98
SEMA3EO15041 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.18■□□□□ 0.98
SEMA3EO15041 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.18■□□□□ 0.98
SEMA3EO15041 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.18■□□□□ 0.98
SEMA3EO15041 KRT18P3-201ENST00000451602 1288 ntBASIC21.18■□□□□ 0.98
SEMA3EO15041 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.18■□□□□ 0.98
SEMA3EO15041 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.18■□□□□ 0.98
SEMA3EO15041 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.18■□□□□ 0.98
SEMA3EO15041 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.18■□□□□ 0.98
SEMA3EO15041 GPR89P-201ENST00000407924 1495 ntBASIC21.18■□□□□ 0.98
SEMA3EO15041 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SEMA3EO15041 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.18■□□□□ 0.98
SEMA3EO15041 AC097637.2-201ENST00000624096 1997 ntBASIC21.17■□□□□ 0.98
SEMA3EO15041 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.17■□□□□ 0.98
SEMA3EO15041 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SEMA3EO15041 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.17■□□□□ 0.98
SEMA3EO15041 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.17■□□□□ 0.98
SEMA3EO15041 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.17■□□□□ 0.98
SEMA3EO15041 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.17■□□□□ 0.98
SEMA3EO15041 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.17■□□□□ 0.98
SEMA3EO15041 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.17■□□□□ 0.98
SEMA3EO15041 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SEMA3EO15041 AC008667.4-201ENST00000607370 168 ntBASIC21.17■□□□□ 0.98
SEMA3EO15041 GPALPP1-207ENST00000611650 899 ntBASIC21.17■□□□□ 0.98
SEMA3EO15041 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.17■□□□□ 0.98
SEMA3EO15041 AL805961.1-202ENST00000641562 540 ntBASIC21.17■□□□□ 0.98
SEMA3EO15041 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SEMA3EO15041 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.17■□□□□ 0.98
SEMA3EO15041 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.17■□□□□ 0.98
SEMA3EO15041 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SEMA3EO15041 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.17■□□□□ 0.98
SEMA3EO15041 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SEMA3EO15041 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 AC135050.7-201ENST00000624508 2218 ntBASIC21.17■□□□□ 0.98
SEMA3EO15041 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SEMA3EO15041 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms