Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASQ2O14958 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASQ2O14958 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASQ2O14958 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.81■□□□□ 0.28
CASQ2O14958 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASQ2O14958 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASQ2O14958 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASQ2O14958 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CASQ2O14958 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASQ2O14958 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASQ2O14958 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.81■□□□□ 0.28
CASQ2O14958 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 AC005915.1-201ENST00000624912 2018 ntBASIC16.8■□□□□ 0.28
CASQ2O14958 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CASQ2O14958 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.8■□□□□ 0.28
CASQ2O14958 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.8■□□□□ 0.28
CASQ2O14958 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CASQ2O14958 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.8■□□□□ 0.28
CASQ2O14958 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.8■□□□□ 0.28
CASQ2O14958 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.8■□□□□ 0.28
CASQ2O14958 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.8■□□□□ 0.28
CASQ2O14958 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 AC116353.5-201ENST00000638148 1699 ntBASIC16.8■□□□□ 0.28
CASQ2O14958 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CASQ2O14958 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CASQ2O14958 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CASQ2O14958 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 LINC00554-201ENST00000564841 3011 ntBASIC16.8■□□□□ 0.28
CASQ2O14958 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASQ2O14958 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.8■□□□□ 0.28
CASQ2O14958 AC067930.6-201ENST00000623257 4947 ntBASIC16.79■□□□□ 0.28
CASQ2O14958 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CASQ2O14958 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CASQ2O14958 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CASQ2O14958 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CASQ2O14958 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.79■□□□□ 0.28
CASQ2O14958 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CASQ2O14958 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CASQ2O14958 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 AC016769.1-201ENST00000409132 1010 ntBASIC16.79■□□□□ 0.28
CASQ2O14958 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CASQ2O14958 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 AC006015.1-201ENST00000429970 570 ntBASIC16.79■□□□□ 0.28
CASQ2O14958 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CASQ2O14958 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.79■□□□□ 0.28
CASQ2O14958 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.79■□□□□ 0.28
CASQ2O14958 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.79■□□□□ 0.28
CASQ2O14958 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.79■□□□□ 0.28
CASQ2O14958 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CASQ2O14958 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CASQ2O14958 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CASQ2O14958 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
CASQ2O14958 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.79■□□□□ 0.28
CASQ2O14958 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASQ2O14958 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.78■□□□□ 0.28
CASQ2O14958 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASQ2O14958 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms