Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CLDN5O00501 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN5O00501 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN5O00501 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN5O00501 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN5O00501 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN5O00501 AC132938.5-201ENST00000624980 1813 ntBASIC18.63■□□□□ 0.57
CLDN5O00501 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CLDN5O00501 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN5O00501 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN5O00501 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN5O00501 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN5O00501 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN5O00501 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN5O00501 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN5O00501 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN5O00501 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN5O00501 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN5O00501 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN5O00501 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN5O00501 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN5O00501 AL356309.3-201ENST00000624132 1934 ntBASIC18.62■□□□□ 0.57
CLDN5O00501 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN5O00501 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN5O00501 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN5O00501 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN5O00501 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN5O00501 BX005266.1-201ENST00000473402 457 ntBASIC18.62■□□□□ 0.57
CLDN5O00501 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.62■□□□□ 0.57
CLDN5O00501 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN5O00501 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN5O00501 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN5O00501 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN5O00501 AL353593.2-201ENST00000602529 1483 ntBASIC18.62■□□□□ 0.57
CLDN5O00501 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN5O00501 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN5O00501 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN5O00501 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLDN5O00501 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CLDN5O00501 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN5O00501 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLDN5O00501 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLDN5O00501 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN5O00501 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLDN5O00501 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.61■□□□□ 0.57
CLDN5O00501 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN5O00501 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN5O00501 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN5O00501 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN5O00501 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.61■□□□□ 0.57
CLDN5O00501 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 RNPS1P1-201ENST00000507437 918 ntBASIC18.61■□□□□ 0.57
CLDN5O00501 AC021087.4-201ENST00000563761 564 ntBASIC18.61■□□□□ 0.57
CLDN5O00501 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN5O00501 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN5O00501 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN5O00501 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CLDN5O00501 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLDN5O00501 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN5O00501 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN5O00501 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN5O00501 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN5O00501 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN5O00501 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN5O00501 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms