Protein–RNA interactions for Protein: B8ZZ34

SHISA8, Putative protein shisa-8, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA8B8ZZ34 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHISA8B8ZZ34 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.03■□□□□ 0.16
SHISA8B8ZZ34 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHISA8B8ZZ34 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 AC097374.2-201ENST00000618617 1306 ntBASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 TSPY19P-201ENST00000418461 509 ntBASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 DDX43P3-201ENST00000441064 443 ntBASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 TSPY18P-201ENST00000441642 509 ntBASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 AC091304.2-201ENST00000564639 760 ntBASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 AL591684.3-201ENST00000605187 298 ntBASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHISA8B8ZZ34 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 INTS4P1-201ENST00000438455 1935 ntBASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHISA8B8ZZ34 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 POM121L3P-201ENST00000419331 1163 ntBASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 SLC25A6P5-201ENST00000435663 894 ntBASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 IFNL4P1-201ENST00000607083 540 ntBASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 AL121772.3-201ENST00000610840 674 ntBASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SHISA8B8ZZ34 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16■□□□□ 0.15
SHISA8B8ZZ34 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16■□□□□ 0.15
SHISA8B8ZZ34 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16■□□□□ 0.15
SHISA8B8ZZ34 BX276092.7-203ENST00000637198 1536 ntBASIC16■□□□□ 0.15
SHISA8B8ZZ34 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHISA8B8ZZ34 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16■□□□□ 0.15
SHISA8B8ZZ34 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16■□□□□ 0.15
SHISA8B8ZZ34 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms