Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VGLL3A8MV65 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VGLL3A8MV65 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.35■□□□□ 0.37
VGLL3A8MV65 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 AL365203.3-201ENST00000609742 2057 ntBASIC17.35■□□□□ 0.37
VGLL3A8MV65 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 AC005089.1-201ENST00000619486 2241 ntBASIC17.35■□□□□ 0.37
VGLL3A8MV65 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VGLL3A8MV65 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 GRK6P1-201ENST00000400595 1711 ntBASIC17.35■□□□□ 0.37
VGLL3A8MV65 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 AC009090.5-201ENST00000624886 2285 ntBASIC17.35■□□□□ 0.37
VGLL3A8MV65 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.35■□□□□ 0.37
VGLL3A8MV65 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VGLL3A8MV65 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VGLL3A8MV65 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.34■□□□□ 0.37
VGLL3A8MV65 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.34■□□□□ 0.37
VGLL3A8MV65 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
VGLL3A8MV65 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.34■□□□□ 0.37
VGLL3A8MV65 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 AL034346.1-201ENST00000568244 1277 ntBASIC17.34■□□□□ 0.37
VGLL3A8MV65 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VGLL3A8MV65 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
VGLL3A8MV65 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VGLL3A8MV65 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.33■□□□□ 0.37
VGLL3A8MV65 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
VGLL3A8MV65 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
VGLL3A8MV65 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VGLL3A8MV65 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
VGLL3A8MV65 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.33■□□□□ 0.37
VGLL3A8MV65 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VGLL3A8MV65 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VGLL3A8MV65 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
VGLL3A8MV65 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VGLL3A8MV65 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.33■□□□□ 0.37
VGLL3A8MV65 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.33■□□□□ 0.37
VGLL3A8MV65 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.33■□□□□ 0.37
VGLL3A8MV65 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VGLL3A8MV65 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VGLL3A8MV65 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VGLL3A8MV65 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VGLL3A8MV65 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
VGLL3A8MV65 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms