Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC022616.7-201ENST00000525383 220 ntBASIC14.25□□□□□ -0.13
SRRM4A7MD48 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRRM4A7MD48 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 PCDHA12-202ENST00000613593 2588 ntBASIC14.25□□□□□ -0.13
SRRM4A7MD48 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.25□□□□□ -0.13
SRRM4A7MD48 PRORSD1P-202ENST00000563365 2154 ntBASIC14.24□□□□□ -0.13
SRRM4A7MD48 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 AL671277.2-201ENST00000458060 996 ntBASIC14.24□□□□□ -0.13
SRRM4A7MD48 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 BX276092.7-203ENST00000637198 1536 ntBASIC14.24□□□□□ -0.13
SRRM4A7MD48 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.24□□□□□ -0.13
SRRM4A7MD48 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SRRM4A7MD48 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRRM4A7MD48 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SRRM4A7MD48 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRRM4A7MD48 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRRM4A7MD48 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SRRM4A7MD48 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRRM4A7MD48 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRRM4A7MD48 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SRRM4A7MD48 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRRM4A7MD48 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SRRM4A7MD48 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRRM4A7MD48 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SRRM4A7MD48 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRRM4A7MD48 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.22□□□□□ -0.13
SRRM4A7MD48 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms