Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.42■□□□□ 0.06
SHISA3A0PJX4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SHISA3A0PJX4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 AC092068.3-201ENST00000587894 2016 ntBASIC15.41■□□□□ 0.06
SHISA3A0PJX4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 KRT18P29-201ENST00000397031 1267 ntBASIC15.41■□□□□ 0.06
SHISA3A0PJX4 CRYGFP-201ENST00000418459 633 ntBASIC15.41■□□□□ 0.06
SHISA3A0PJX4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 CD177P1-201ENST00000606252 935 ntBASIC15.41■□□□□ 0.06
SHISA3A0PJX4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 LINC01311-201ENST00000565162 1445 ntBASIC15.41■□□□□ 0.06
SHISA3A0PJX4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHISA3A0PJX4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHISA3A0PJX4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHISA3A0PJX4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms