Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 SEC1P-202ENST00000473944 940 ntBASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 FAM87A-204ENST00000613235 858 ntBASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 HMGA1P5-201ENST00000412453 271 ntBASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 ECEL1P2-202ENST00000465689 757 ntBASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 AL512604.3-201ENST00000569583 964 ntBASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 AL139384.1-201ENST00000612143 3047 ntBASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 AL121761.2-201ENST00000598007 1648 ntBASIC17.07■□□□□ 0.32
RNF103-CHMP3A0A140T963 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF103-CHMP3A0A140T963 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF103-CHMP3A0A140T963 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms