Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 FAM197Y1-201ENST00000421178 764 ntBASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 AC104390.1-201ENST00000555663 520 ntBASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 MIR3180-4-201ENST00000582223 153 ntBASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 DGCR10-201ENST00000609839 495 ntBASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 AC073648.6-201ENST00000641589 218 ntBASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 AC009949.1-201ENST00000623048 1830 ntBASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 C1QBPP2-201ENST00000528754 825 ntBASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 AC060834.1-201ENST00000443027 2032 ntBASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV18A0A075B6X5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRAV18A0A075B6X5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms