Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 PTENP1-202ENST00000532280 3996 ntBASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 AK3-203ENST00000447596 705 ntTSL 2 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 AL356740.2-201ENST00000601559 647 ntBASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 AC105233.4-201ENST00000642045 216 ntBASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 GAS2L1P1-201ENST00000420145 1480 ntBASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRBV20-1A0A075B6N2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 KRT8P8-201ENST00000434750 1448 ntBASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 RBM17P2-201ENST00000616397 1405 ntBASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 MIR6724-1-201ENST00000616420 92 ntBASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 MIR6724-2-201ENST00000616483 92 ntBASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 MIR6724-4-201ENST00000617390 92 ntBASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 MIR6724-3-201ENST00000622482 92 ntBASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
TRBV20-1A0A075B6N2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms