Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP4B1Q9Y6B7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 AGGF1P2-201ENST00000426656 2106 ntBASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 AL137013.1-201ENST00000432946 1228 ntBASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 AL355312.1-201ENST00000407115 2176 ntBASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP4B1Q9Y6B7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 AL138688.1-201ENST00000624851 1594 ntBASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
AP4B1Q9Y6B7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP4B1Q9Y6B7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.02■□□□□ 0.31
AP4B1Q9Y6B7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
AP4B1Q9Y6B7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.02■□□□□ 0.31
AP4B1Q9Y6B7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 KRT18P55-202ENST00000578578 1546 ntBASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 AC008741.2-201ENST00000612792 3115 ntBASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4B1Q9Y6B7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms