Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 RASA4CP-201ENST00000424092 1398 ntBASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAPPC1Q9Y5R8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 HTR7P1-201ENST00000538670 1336 ntBASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 AL662844.4-201ENST00000606367 2838 ntBASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 AL390719.1-204ENST00000412397 1219 ntBASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 LINC00304-203ENST00000565008 1864 ntBASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAPPC1Q9Y5R8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 KRT18P41-201ENST00000518924 1277 ntBASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 AC093010.1-201ENST00000473625 1624 ntBASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAPPC1Q9Y5R8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms