Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA9Q9Y5G4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 AC140113.2-201ENST00000604370 208 ntBASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 AC008735.5-201ENST00000623544 497 ntBASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 AC012313.1-201ENST00000593393 3059 ntBASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA9Q9Y5G4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 AC098831.1-202ENST00000438821 336 ntBASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 AC034105.1-201ENST00000563488 319 ntBASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 AC025062.2-201ENST00000605477 670 ntBASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 Z83851.2-201ENST00000609564 659 ntBASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA9Q9Y5G4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 AC092910.1-201ENST00000482027 1129 ntBASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 AL356488.2-201ENST00000602755 427 ntBASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA9Q9Y5G4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.52■□□□□ 0.23
PCDHGA9Q9Y5G4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA9Q9Y5G4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
PCDHGA9Q9Y5G4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDHGA9Q9Y5G4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA9Q9Y5G4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGA9Q9Y5G4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDHGA9Q9Y5G4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.52■□□□□ 0.23
PCDHGA9Q9Y5G4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms