Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 AC093909.1-201ENST00000504731 1122 ntBASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 REXO1L6P-202ENST00000619970 1078 ntBASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 AC012183.1-201ENST00000625197 499 ntBASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB11Q9Y5F2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 PMS2P1-201ENST00000431037 1228 ntBASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 MTCL1P1-201ENST00000446207 792 ntBASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB11Q9Y5F2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 AC112698.1-201ENST00000510299 916 ntBASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB11Q9Y5F2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms