Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 AC004408.2-201ENST00000623613 2777 ntBASIC21.3■■□□□ 1
ZC3H4Q9UPT8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 AL049757.1-201ENST00000616842 1596 ntBASIC21.3■■□□□ 1
ZC3H4Q9UPT8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.3■■□□□ 1
ZC3H4Q9UPT8 KLF2P3-201ENST00000451977 1087 ntBASIC21.29■■□□□ 1
ZC3H4Q9UPT8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 AC027307.3-201ENST00000594262 1100 ntBASIC21.29■■□□□ 1
ZC3H4Q9UPT8 LINC02560-201ENST00000596379 459 ntBASIC21.29■■□□□ 1
ZC3H4Q9UPT8 AC026120.1-201ENST00000611536 926 ntBASIC21.29■■□□□ 1
ZC3H4Q9UPT8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 AP001059.3-201ENST00000619053 235 ntBASIC21.29■■□□□ 1
ZC3H4Q9UPT8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 AC099343.3-201ENST00000605834 2503 ntBASIC21.29■■□□□ 1
ZC3H4Q9UPT8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 CRB3P1-201ENST00000449338 276 ntBASIC21.29■■□□□ 1
ZC3H4Q9UPT8 AC069335.1-201ENST00000489972 472 ntBASIC21.29■■□□□ 1
ZC3H4Q9UPT8 FAM86C2P-203ENST00000528684 1004 ntBASIC21.29■■□□□ 1
ZC3H4Q9UPT8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H4Q9UPT8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 MIR943-201ENST00000401286 94 ntBASIC21.28■■□□□ 1
ZC3H4Q9UPT8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 TIMM8BP1-201ENST00000452384 211 ntBASIC21.28■■□□□ 1
ZC3H4Q9UPT8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 AP005018.1-201ENST00000525475 301 ntBASIC21.28■■□□□ 1
ZC3H4Q9UPT8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.28■■□□□ 1
ZC3H4Q9UPT8 AC006116.8-202ENST00000587620 1550 ntBASIC21.27■■□□□ 1
ZC3H4Q9UPT8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.27■■□□□ 1
ZC3H4Q9UPT8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
ZC3H4Q9UPT8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZC3H4Q9UPT8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3H4Q9UPT8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.27■■□□□ 1
ZC3H4Q9UPT8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.27■■□□□ 1
ZC3H4Q9UPT8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3H4Q9UPT8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 AC002056.1-201ENST00000395613 760 ntBASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.27■□□□□ 0.99
ZC3H4Q9UPT8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms