Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 NCF1C-201ENST00000438382 1427 ntBASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DNMT3BQ9UBC3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.39■□□□□ 0.54
DNMT3BQ9UBC3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.39■□□□□ 0.54
DNMT3BQ9UBC3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
DNMT3BQ9UBC3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DNMT3BQ9UBC3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
DNMT3BQ9UBC3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 AC135776.1-201ENST00000319817 2481 ntBASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 CRYGEP-201ENST00000412192 528 ntBASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 AC109462.3-201ENST00000573934 613 ntBASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 AC100803.2-201ENST00000562459 1963 ntBASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNMT3BQ9UBC3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 AC003669.1-201ENST00000334569 611 ntBASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 PMS2P2-201ENST00000425039 1128 ntBASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 SIGLEC30P-201ENST00000455569 941 ntBASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 AC108073.2-201ENST00000464002 357 ntBASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNMT3BQ9UBC3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 MCCD1P2-201ENST00000423228 335 ntBASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 DNAJB3-202ENST00000449667 1266 ntBASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 AC092865.6-201ENST00000642101 219 ntBASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.37■□□□□ 0.53
DNMT3BQ9UBC3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3BQ9UBC3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms