Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 AC025580.3-201ENST00000617932 1424 ntBASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRMT13Q9NUP7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 FAM58CP-201ENST00000435741 640 ntBASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 AL353135.1-201ENST00000606729 504 ntBASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 AC009336.1-201ENST00000608941 1553 ntBASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRMT13Q9NUP7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 AP002414.1-201ENST00000391405 1147 ntBASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 LINC00982-205ENST00000420957 435 ntBASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 RHOQP3-201ENST00000437982 621 ntBASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 AC093028.1-201ENST00000622998 982 ntBASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.29■□□□□ 0.68
TRMT13Q9NUP7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 IGHV3-52-201ENST00000519770 353 ntBASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 AC093677.2-201ENST00000600169 1863 ntBASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRMT13Q9NUP7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.27■□□□□ 0.68
TRMT13Q9NUP7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRMT13Q9NUP7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRMT13Q9NUP7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms