Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 AC126177.7-201ENST00000547904 679 ntBASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC9.02□□□□□ -0.96
CDC42SE1Q9NRR8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
CDC42SE1Q9NRR8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms