Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 AL049757.1-201ENST00000616842 1596 ntBASIC18.66■□□□□ 0.58
LHX5Q9H2C1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 AC026471.1-201ENST00000564629 3026 ntBASIC18.66■□□□□ 0.58
LHX5Q9H2C1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LHX5Q9H2C1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 POM121L3P-201ENST00000419331 1163 ntBASIC18.65■□□□□ 0.58
LHX5Q9H2C1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 AC104819.1-201ENST00000504587 486 ntBASIC18.65■□□□□ 0.58
LHX5Q9H2C1 AP000867.3-201ENST00000524675 377 ntBASIC18.65■□□□□ 0.58
LHX5Q9H2C1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LHX5Q9H2C1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LHX5Q9H2C1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LHX5Q9H2C1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LHX5Q9H2C1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.64■□□□□ 0.58
LHX5Q9H2C1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LHX5Q9H2C1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.64■□□□□ 0.58
LHX5Q9H2C1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 MYCLP1-201ENST00000372451 1075 ntBASIC18.64■□□□□ 0.57
LHX5Q9H2C1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 INTS4P1-201ENST00000438455 1935 ntBASIC18.64■□□□□ 0.57
LHX5Q9H2C1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LHX5Q9H2C1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 AC026396.1-201ENST00000419388 421 ntBASIC18.63■□□□□ 0.57
LHX5Q9H2C1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.63■□□□□ 0.57
LHX5Q9H2C1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms