Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 TPM1-223ENST00000560445 485 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC141586.2-201ENST00000565111 572 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC093525.5-201ENST00000569220 572 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC100832.2-201ENST00000582080 776 ntBASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 SKAP1-AS1-201ENST00000582246 687 ntTSL 2 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC005357.2-202ENST00000590507 1060 ntBASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC018755.3-202ENST00000596210 929 ntBASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC112503.1-201ENST00000608436 391 ntBASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC097505.1-201ENST00000610199 565 ntBASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC012676.3-201ENST00000614983 479 ntBASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 AC127496.7-201ENST00000625110 1798 ntBASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
KRTAP3-3Q9BYR6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 MAPK9-205ENST00000397072 1416 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AP002907.1-201ENST00000606361 1430 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC067931.3-201ENST00000624905 1518 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC005837.1-201ENST00000565271 1717 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 ALDH1A3-203ENST00000557963 1670 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AL357315.2-201ENST00000604667 1675 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 PDPN-203ENST00000376061 1368 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 TPM3P2-201ENST00000397772 723 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 LYPLA1P3-201ENST00000402650 695 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC078883.3-202ENST00000417539 754 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 RPS8P6-201ENST00000426177 609 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC01004-202ENST00000450686 538 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 MTND1P11-201ENST00000456661 876 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 OR7E22P-201ENST00000478335 1035 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC095052.1-201ENST00000509955 863 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC073863.1-201ENST00000550206 570 ntTSL 4 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 RN7SL391P-201ENST00000582559 284 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AL390816.3-201ENST00000604527 1066 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 BX640515.1-201ENST00000617215 977 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC139768.1-201ENST00000620274 898 ntBASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 ATP6V1C1-203ENST00000518857 1501 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 ARL6IP5-203ENST00000478935 1449 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 CCNB3P1-201ENST00000504855 1431 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms