Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCM2Q9BSQ5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 GNAS-203ENST00000306120 1878 ntBASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 AC134043.2-201ENST00000624206 2238 ntBASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 AC122714.2-201ENST00000502787 707 ntBASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 FOSL1P1-201ENST00000511041 816 ntBASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 AC138894.3-201ENST00000603787 634 ntBASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
CCM2Q9BSQ5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 RCN1P2-201ENST00000398357 915 ntBASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 LINC01711-201ENST00000598340 967 ntBASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 AC114341.1-201ENST00000618070 349 ntBASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCM2Q9BSQ5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 NUS1P2-201ENST00000417358 873 ntBASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 TSPY19P-201ENST00000418461 509 ntBASIC17.4■□□□□ 0.38
CCM2Q9BSQ5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms