Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 AC104390.1-201ENST00000555663 520 ntBASIC14.37□□□□□ -0.11
RAB40CQ96S21 SLC25A1P4-201ENST00000567977 778 ntBASIC14.37□□□□□ -0.11
RAB40CQ96S21 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40CQ96S21 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB40CQ96S21 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 MESTP1-201ENST00000404287 994 ntBASIC14.36□□□□□ -0.11
RAB40CQ96S21 DDX43P3-201ENST00000441064 443 ntBASIC14.36□□□□□ -0.11
RAB40CQ96S21 AL158047.1-201ENST00000445918 881 ntBASIC14.36□□□□□ -0.11
RAB40CQ96S21 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 RARRES2P10-201ENST00000564312 460 ntBASIC14.36□□□□□ -0.11
RAB40CQ96S21 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 MIR4674-201ENST00000582457 87 ntBASIC14.36□□□□□ -0.11
RAB40CQ96S21 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB40CQ96S21 UBALD1-205ENST00000590891 2641 ntBASIC14.36□□□□□ -0.11
RAB40CQ96S21 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB40CQ96S21 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 REXO1L11P-201ENST00000620964 1927 ntBASIC14.35□□□□□ -0.11
RAB40CQ96S21 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.35□□□□□ -0.11
RAB40CQ96S21 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms