Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 AC092850.2-201ENST00000623821 2697 ntBASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 DUTP2-201ENST00000519164 463 ntBASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 C1QL1P1-201ENST00000568105 661 ntBASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 AC016396.2-201ENST00000562575 1417 ntBASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 AC132872.4-202ENST00000622924 2756 ntBASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RAB3IPQ96QF0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 MIR149-201ENST00000384879 89 ntBASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 MIR564-202ENST00000385049 94 ntBASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 AC007322.1-201ENST00000426983 750 ntBASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
RAB3IPQ96QF0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IPQ96QF0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IPQ96QF0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.27■□□□□ 0.35
RAB3IPQ96QF0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IPQ96QF0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IPQ96QF0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IPQ96QF0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IPQ96QF0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3IPQ96QF0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 AC034236.2-201ENST00000606662 1610 ntBASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 AC092666.2-201ENST00000613287 246 ntBASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 AC073111.5-205ENST00000641717 521 ntBASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3IPQ96QF0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms