Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
DUX3Q96PT4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DUX3Q96PT4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.77□□□□□ -0.2
DUX3Q96PT4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DUX3Q96PT4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
DUX3Q96PT4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 AL096828.2-201ENST00000567259 1965 ntBASIC13.77□□□□□ -0.21
DUX3Q96PT4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
DUX3Q96PT4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
DUX3Q96PT4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 FZD10-202ENST00000539839 3282 ntBASIC13.76□□□□□ -0.21
DUX3Q96PT4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.76□□□□□ -0.21
DUX3Q96PT4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 FAM197Y8-203ENST00000450145 560 ntBASIC13.76□□□□□ -0.21
DUX3Q96PT4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 AC009533.2-201ENST00000543664 586 ntBASIC13.76□□□□□ -0.21
DUX3Q96PT4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 AP001269.4-201ENST00000609611 512 ntBASIC13.76□□□□□ -0.21
DUX3Q96PT4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.76□□□□□ -0.21
DUX3Q96PT4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
DUX3Q96PT4 FER1L4-210ENST00000615531 5998 ntBASIC13.76□□□□□ -0.21
DUX3Q96PT4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms