Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00479Q96M42 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 AC011270.2-201ENST00000624293 2550 ntBASIC13.54□□□□□ -0.24
LINC00479Q96M42 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.54□□□□□ -0.24
LINC00479Q96M42 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 AL355802.2-201ENST00000402069 882 ntBASIC13.54□□□□□ -0.24
LINC00479Q96M42 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 KRT8P7-201ENST00000533003 1432 ntBASIC13.54□□□□□ -0.24
LINC00479Q96M42 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00479Q96M42 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00479Q96M42 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00479Q96M42 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00479Q96M42 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00479Q96M42 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00479Q96M42 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00479Q96M42 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LINC00479Q96M42 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00479Q96M42 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00479Q96M42 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00479Q96M42 AC005915.1-201ENST00000624912 2018 ntBASIC13.52□□□□□ -0.24
LINC00479Q96M42 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00479Q96M42 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00479Q96M42 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LINC00479Q96M42 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00479Q96M42 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.52□□□□□ -0.24
LINC00479Q96M42 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00479Q96M42 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00479Q96M42 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00479Q96M42 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 ESRRAP1-201ENST00000400596 1257 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms