Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 AP005117.1-201ENST00000584346 1413 ntBASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 AL354751.1-201ENST00000412768 1863 ntBASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.72□□□□□ -0.21
UBE2E2Q96LR5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 AC026396.1-201ENST00000419388 421 ntBASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 SCARNA2-201ENST00000458748 420 ntBASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 AF238378.1-201ENST00000526806 358 ntBASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 AC064862.7-201ENST00000604520 867 ntBASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 AL355877.3-201ENST00000622820 899 ntBASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2E2Q96LR5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBE2E2Q96LR5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
UBE2E2Q96LR5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
UBE2E2Q96LR5 AC009949.1-201ENST00000623048 1830 ntBASIC13.71□□□□□ -0.22
UBE2E2Q96LR5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBE2E2Q96LR5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.71□□□□□ -0.22
UBE2E2Q96LR5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBE2E2Q96LR5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 SLC25A6P5-201ENST00000435663 894 ntBASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 MTDHP3-201ENST00000594186 672 ntBASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 AP001269.4-201ENST00000609611 512 ntBASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 AL031008.1-201ENST00000619963 541 ntBASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2E2Q96LR5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms