Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDLIM5Q96HC4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.27■□□□□ 0.35
PDLIM5Q96HC4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.27■□□□□ 0.35
PDLIM5Q96HC4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM5Q96HC4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM5Q96HC4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.27■□□□□ 0.35
PDLIM5Q96HC4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM5Q96HC4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.27■□□□□ 0.35
PDLIM5Q96HC4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDLIM5Q96HC4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 PRORSD1P-202ENST00000563365 2154 ntBASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 AC009533.2-201ENST00000543664 586 ntBASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.26■□□□□ 0.35
PDLIM5Q96HC4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 AP001094.4-201ENST00000579008 2176 ntBASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 FAM220CP-201ENST00000395253 831 ntBASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 PCED1CP-201ENST00000419887 785 ntBASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDLIM5Q96HC4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 AL049757.1-201ENST00000616842 1596 ntBASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDLIM5Q96HC4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms