Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.86□□□□□ -0.03
TIMD4Q96H15 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TIMD4Q96H15 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.86□□□□□ -0.03
TIMD4Q96H15 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.86□□□□□ -0.03
TIMD4Q96H15 AP001269.4-201ENST00000609611 512 ntBASIC14.86□□□□□ -0.03
TIMD4Q96H15 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TIMD4Q96H15 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMD4Q96H15 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 COX5BP2-201ENST00000392354 334 ntBASIC14.85□□□□□ -0.03
TIMD4Q96H15 DDX43P3-201ENST00000441064 443 ntBASIC14.85□□□□□ -0.03
TIMD4Q96H15 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 AP001005.1-201ENST00000571755 1248 ntBASIC14.85□□□□□ -0.03
TIMD4Q96H15 AL139288.1-201ENST00000623748 933 ntBASIC14.85□□□□□ -0.03
TIMD4Q96H15 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 AL356309.3-201ENST00000624132 1934 ntBASIC14.85□□□□□ -0.03
TIMD4Q96H15 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 FLJ13224-201ENST00000313737 1514 ntBASIC14.85□□□□□ -0.03
TIMD4Q96H15 BX276092.7-203ENST00000637198 1536 ntBASIC14.85□□□□□ -0.03
TIMD4Q96H15 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.85□□□□□ -0.03
TIMD4Q96H15 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMD4Q96H15 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TIMD4Q96H15 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TIMD4Q96H15 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TIMD4Q96H15 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.83□□□□□ -0.03
TIMD4Q96H15 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.83□□□□□ -0.03
TIMD4Q96H15 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TIMD4Q96H15 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TIMD4Q96H15 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms