Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CHCHD1Q96BP2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
CHCHD1Q96BP2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CHCHD1Q96BP2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 KRT8P11-201ENST00000409686 1436 ntBASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 KRT8P50-201ENST00000562022 1438 ntBASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 FLJ16779-201ENST00000612722 7638 ntBASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 MIR149-201ENST00000384879 89 ntBASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 CYP2T1P-201ENST00000432607 1285 ntBASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CHCHD1Q96BP2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 KRT18P11-201ENST00000435214 1283 ntBASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 AC096631.2-201ENST00000436136 790 ntBASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 OR10C1-204ENST00000622521 1039 ntBASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 AC006557.6-201ENST00000623071 864 ntBASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 AL365203.3-201ENST00000609742 2057 ntBASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 NORAD-201ENST00000565493 5339 ntBASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.88□□□□□ -0.35
CHCHD1Q96BP2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms