Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 KRT18P1-202ENST00000452408 1331 ntBASIC19.6■□□□□ 0.73
HPS3Q969F9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 AP002414.4-201ENST00000589764 1148 ntBASIC19.6■□□□□ 0.73
HPS3Q969F9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.6■□□□□ 0.73
HPS3Q969F9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HPS3Q969F9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
HPS3Q969F9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.6■□□□□ 0.73
HPS3Q969F9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 SIRPAP1-201ENST00000448467 1770 ntBASIC19.6■□□□□ 0.73
HPS3Q969F9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.6■□□□□ 0.73
HPS3Q969F9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.59■□□□□ 0.73
HPS3Q969F9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HPS3Q969F9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.59■□□□□ 0.73
HPS3Q969F9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
HPS3Q969F9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 TPSP2-201ENST00000561760 610 ntBASIC19.59■□□□□ 0.73
HPS3Q969F9 AC011840.4-201ENST00000578471 627 ntBASIC19.59■□□□□ 0.73
HPS3Q969F9 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.59■□□□□ 0.73
HPS3Q969F9 AL138831.2-201ENST00000606564 490 ntBASIC19.59■□□□□ 0.73
HPS3Q969F9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.59■□□□□ 0.73
HPS3Q969F9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HPS3Q969F9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HPS3Q969F9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
HPS3Q969F9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HPS3Q969F9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS3Q969F9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HPS3Q969F9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS3Q969F9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS3Q969F9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HPS3Q969F9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HPS3Q969F9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS3Q969F9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HPS3Q969F9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS3Q969F9 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.58■□□□□ 0.73
HPS3Q969F9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
HPS3Q969F9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS3Q969F9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS3Q969F9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.58■□□□□ 0.72
HPS3Q969F9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.58■□□□□ 0.72
HPS3Q969F9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.58■□□□□ 0.72
HPS3Q969F9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.58■□□□□ 0.72
HPS3Q969F9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.58■□□□□ 0.72
HPS3Q969F9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS3Q969F9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS3Q969F9 MIR3180-1-201ENST00000580374 94 ntBASIC19.58■□□□□ 0.72
HPS3Q969F9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.58■□□□□ 0.72
HPS3Q969F9 MIR3180-3-201ENST00000584616 94 ntBASIC19.58■□□□□ 0.72
HPS3Q969F9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS3Q969F9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS3Q969F9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HPS3Q969F9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS3Q969F9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS3Q969F9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HPS3Q969F9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
HPS3Q969F9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS3Q969F9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS3Q969F9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS3Q969F9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
HPS3Q969F9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS3Q969F9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS3Q969F9 BX276092.7-203ENST00000637198 1536 ntBASIC19.57■□□□□ 0.72
HPS3Q969F9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS3Q969F9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS3Q969F9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS3Q969F9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS3Q969F9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS3Q969F9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
HPS3Q969F9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS3Q969F9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HPS3Q969F9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.57■□□□□ 0.72
HPS3Q969F9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.57■□□□□ 0.72
HPS3Q969F9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.57■□□□□ 0.72
HPS3Q969F9 LINC01451-201ENST00000623792 534 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms