Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RAPGEF4Q8WZA2 BCAR1-209ENST00000546196 1340 ntBASIC23.08■■□□□ 1.28
RAPGEF4Q8WZA2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 WIZP1-201ENST00000531444 2299 ntBASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 PON3-203ENST00000427422 894 ntTSL 3 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 AC002558.1-201ENST00000488906 803 ntBASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 OR7E47P-204ENST00000575924 449 ntBASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RAPGEF4Q8WZA2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 PC-214ENST00000628663 1470 ntTSL 5 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 RFPL4AP1-201ENST00000530883 850 ntBASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 KRT19P2-202ENST00000557173 1012 ntBASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAPGEF4Q8WZA2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 CYMP-203ENST00000474680 1263 ntBASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.05■■□□□ 1.28
RAPGEF4Q8WZA2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 MYCLP1-201ENST00000372451 1075 ntBASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 RHOQP3-201ENST00000437982 621 ntBASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 AL031432.2-201ENST00000566714 459 ntBASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 AL928711.1-201ENST00000570165 459 ntBASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAPGEF4Q8WZA2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
RAPGEF4Q8WZA2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms