Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.42■□□□□ 0.22
CT55Q8WUE5 VN2R19P-201ENST00000442399 1052 ntBASIC16.42■□□□□ 0.22
CT55Q8WUE5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 AC004790.2-201ENST00000623588 572 ntBASIC16.42■□□□□ 0.22
CT55Q8WUE5 AC079781.4-201ENST00000641908 219 ntBASIC16.42■□□□□ 0.22
CT55Q8WUE5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 AC093503.3-201ENST00000624917 2352 ntBASIC16.42■□□□□ 0.22
CT55Q8WUE5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 AL020996.1-203ENST00000536896 2307 ntBASIC16.41■□□□□ 0.22
CT55Q8WUE5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 AC018845.2-201ENST00000568326 409 ntBASIC16.41■□□□□ 0.22
CT55Q8WUE5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 AC009336.1-201ENST00000608941 1553 ntBASIC16.41■□□□□ 0.22
CT55Q8WUE5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 BX323043.1-201ENST00000641006 1765 ntBASIC16.41■□□□□ 0.22
CT55Q8WUE5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CT55Q8WUE5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CT55Q8WUE5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 AP000997.3-201ENST00000623333 2250 ntBASIC16.4■□□□□ 0.22
CT55Q8WUE5 AC097637.2-201ENST00000624096 1997 ntBASIC16.4■□□□□ 0.22
CT55Q8WUE5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 HCG4B-203ENST00000450128 991 ntBASIC16.4■□□□□ 0.22
CT55Q8WUE5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CT55Q8WUE5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.4■□□□□ 0.22
CT55Q8WUE5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms