Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.33■□□□□ 0.53
SH3RF2Q8TEC5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SH3RF2Q8TEC5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.33■□□□□ 0.53
SH3RF2Q8TEC5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SH3RF2Q8TEC5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3RF2Q8TEC5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.33■□□□□ 0.53
SH3RF2Q8TEC5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.33■□□□□ 0.53
SH3RF2Q8TEC5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SH3RF2Q8TEC5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 AC006538.3-201ENST00000612495 578 ntBASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 AL022326.1-202ENST00000641533 845 ntBASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 NOC2LP1-202ENST00000452600 2235 ntBASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
SH3RF2Q8TEC5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 AC104109.2-201ENST00000602919 1418 ntBASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 AC004817.3-201ENST00000602957 2129 ntBASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 AC105339.3-201ENST00000560043 636 ntBASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 AC073592.4-201ENST00000623827 446 ntBASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 AC073592.5-201ENST00000624854 528 ntBASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3RF2Q8TEC5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 SPDYE21P-201ENST00000413323 827 ntBASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 LAGE3P1-201ENST00000425356 484 ntBASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 AC145285.3-201ENST00000564603 959 ntBASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 TERC-201ENST00000602385 541 ntBASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 AC100803.2-201ENST00000562459 1963 ntBASIC18.31■□□□□ 0.52
SH3RF2Q8TEC5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms