Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 AC073592.3-201ENST00000625118 1834 ntBASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 BX005266.1-201ENST00000473402 457 ntBASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 AC092865.5-201ENST00000545435 363 ntBASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 AC107918.4-202ENST00000641623 219 ntBASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHKBP1Q8TBC3 PMPCAP1-201ENST00000508114 1576 ntBASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 AC122714.2-201ENST00000502787 707 ntBASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 RNA5SP415-201ENST00000517246 115 ntBASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 AC034105.1-201ENST00000563488 319 ntBASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 AC079776.2-201ENST00000641154 1609 ntBASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHKBP1Q8TBC3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 AP002414.3-201ENST00000589352 1468 ntBASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 AC105339.3-201ENST00000560043 636 ntBASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.54■□□□□ 0.56
SHKBP1Q8TBC3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 PGAM5P1-201ENST00000518923 814 ntBASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 DUTP2-201ENST00000519164 463 ntBASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms