Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 PAWRP1-201ENST00000451083 565 ntBASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 RPS15P9-201ENST00000494093 319 ntBASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 AC093512.1-201ENST00000617969 520 ntBASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNIP1Q8TAD8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNIP1Q8TAD8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNIP1Q8TAD8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 AL020989.1-201ENST00000422979 469 ntBASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 AC103564.2-201ENST00000432853 1299 ntBASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 AC004449.1-201ENST00000564240 433 ntBASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 AC004835.2-201ENST00000603762 682 ntBASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 AC010654.1-201ENST00000615722 808 ntBASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.64■□□□□ 0.25
SNIP1Q8TAD8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 NCF1C-201ENST00000438382 1427 ntBASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 IGLL3P-201ENST00000412472 434 ntBASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 AC138761.1-201ENST00000584393 385 ntBASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 AC004790.2-201ENST00000623588 572 ntBASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 AC073592.5-201ENST00000624854 528 ntBASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.63■□□□□ 0.25
SNIP1Q8TAD8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms