Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 COX5BP2-201ENST00000392354 334 ntBASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 AC009336.1-201ENST00000608941 1553 ntBASIC27.45■■□□□ 1.98
CFAP43Q8NDM7 AP000997.3-201ENST00000623333 2250 ntBASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 KRT18P55-202ENST00000578578 1546 ntBASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 MRPL20P1-201ENST00000400819 433 ntBASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 AC002558.1-201ENST00000488906 803 ntBASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC27.44■■□□□ 1.98
CFAP43Q8NDM7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 AC092474.2-201ENST00000424288 719 ntBASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 AC109462.3-201ENST00000573934 613 ntBASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 STK25P1-201ENST00000585406 838 ntBASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 AC004461.1-201ENST00000412461 403 ntBASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 RHOQP3-201ENST00000437982 621 ntBASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC27.43■■□□□ 1.98
CFAP43Q8NDM7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CFAP43Q8NDM7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 AC022145.2-201ENST00000598203 171 ntBASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 AC009093.7-201ENST00000623853 1223 ntBASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 AC092902.6-201ENST00000641783 218 ntBASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 REXO1L11P-201ENST00000620964 1927 ntBASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 BICD1-207ENST00000551848 1962 ntBASIC27.41■■□□□ 1.98
CFAP43Q8NDM7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 AC068137.2-201ENST00000605408 478 ntBASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 AL354751.1-201ENST00000412768 1863 ntBASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CFAP43Q8NDM7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms