Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AC132938.5-201ENST00000624980 1813 ntBASIC17■□□□□ 0.31
LINC01555Q8NAE3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 LINC01451-201ENST00000623792 534 ntBASIC17■□□□□ 0.31
LINC01555Q8NAE3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01555Q8NAE3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17■□□□□ 0.31
LINC01555Q8NAE3 HLA-J-201ENST00000462773 1622 ntBASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 RBM17P3-201ENST00000417687 1192 ntBASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AL355877.3-201ENST00000622820 899 ntBASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 AC073592.5-201ENST00000624854 528 ntBASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LINC01555Q8NAE3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 AC133963.1-201ENST00000504166 1679 ntBASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 AC004870.1-201ENST00000315132 882 ntBASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 AC079781.3-201ENST00000449110 356 ntBASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 FGFR3P6-201ENST00000457012 610 ntBASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 MTDHP3-201ENST00000594186 672 ntBASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 AC008608.2-201ENST00000606089 416 ntBASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 AL031008.1-201ENST00000619963 541 ntBASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01555Q8NAE3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms