Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
CDRT4Q8N9R6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDRT4Q8N9R6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 AL845331.1-201ENST00000424978 1190 ntBASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 KRT18P35-201ENST00000510488 1269 ntBASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDRT4Q8N9R6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 AC010460.3-201ENST00000511359 1579 ntBASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 AL138831.2-201ENST00000606564 490 ntBASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 KRT18P1-202ENST00000452408 1331 ntBASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDRT4Q8N9R6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 AC007967.3-201ENST00000434308 558 ntBASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 AC002558.1-201ENST00000488906 803 ntBASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.43■□□□□ 0.22
CDRT4Q8N9R6 AC005336.2-201ENST00000593183 939 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms