Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 TSPY19P-201ENST00000418461 509 ntBASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AC103564.2-201ENST00000432853 1299 ntBASIC18.14■□□□□ 0.49
RTL3Q8N8U3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 TSPY18P-201ENST00000441642 509 ntBASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AC002558.1-201ENST00000488906 803 ntBASIC18.14■□□□□ 0.49
RTL3Q8N8U3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 MIR5100-201ENST00000579544 119 ntBASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AC019129.2-201ENST00000609837 1235 ntBASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AL121772.3-201ENST00000610840 674 ntBASIC18.14■□□□□ 0.49
RTL3Q8N8U3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 AC133963.1-201ENST00000504166 1679 ntBASIC18.14■□□□□ 0.49
RTL3Q8N8U3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RTL3Q8N8U3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 HLA-J-201ENST00000462773 1622 ntBASIC18.13■□□□□ 0.49
RTL3Q8N8U3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.13■□□□□ 0.49
RTL3Q8N8U3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RTL3Q8N8U3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 KRT18P31-201ENST00000506277 1292 ntBASIC18.12■□□□□ 0.49
RTL3Q8N8U3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 AL591684.3-201ENST00000605187 298 ntBASIC18.12■□□□□ 0.49
RTL3Q8N8U3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL3Q8N8U3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTL3Q8N8U3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTL3Q8N8U3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.11■□□□□ 0.49
RTL3Q8N8U3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms