Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 RBM17P3-201ENST00000417687 1192 ntBASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 RN7SL510P-201ENST00000581311 263 ntBASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 AC134043.2-201ENST00000624206 2238 ntBASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAM1L1Q8N609 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 AP005117.1-201ENST00000584346 1413 ntBASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 AC004870.1-201ENST00000315132 882 ntBASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 MYCLP1-201ENST00000372451 1075 ntBASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 PMPCAP1-201ENST00000508114 1576 ntBASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 HLA-J-201ENST00000462773 1622 ntBASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAM1L1Q8N609 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 AC018470.1-201ENST00000624790 3129 ntBASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 EMBP1-201ENST00000458200 901 ntBASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAM1L1Q8N609 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRAM1L1Q8N609 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAM1L1Q8N609 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAM1L1Q8N609 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAM1L1Q8N609 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAM1L1Q8N609 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAM1L1Q8N609 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAM1L1Q8N609 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms