Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.45■□□□□ 0.7
NME8Q8N427 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.45■□□□□ 0.7
NME8Q8N427 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.45■□□□□ 0.7
NME8Q8N427 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.45■□□□□ 0.7
NME8Q8N427 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.45■□□□□ 0.7
NME8Q8N427 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.45■□□□□ 0.7
NME8Q8N427 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.45■□□□□ 0.7
NME8Q8N427 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 AC006557.2-201ENST00000592985 1240 ntBASIC19.45■□□□□ 0.7
NME8Q8N427 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.45■□□□□ 0.7
NME8Q8N427 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NME8Q8N427 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
NME8Q8N427 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.45■□□□□ 0.7
NME8Q8N427 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.45■□□□□ 0.7
NME8Q8N427 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.45■□□□□ 0.7
NME8Q8N427 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NME8Q8N427 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.44■□□□□ 0.7
NME8Q8N427 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.44■□□□□ 0.7
NME8Q8N427 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 MIR940-201ENST00000401276 94 ntBASIC19.44■□□□□ 0.7
NME8Q8N427 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.44■□□□□ 0.7
NME8Q8N427 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.44■□□□□ 0.7
NME8Q8N427 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 AL589182.2-201ENST00000619332 1049 ntBASIC19.44■□□□□ 0.7
NME8Q8N427 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.44■□□□□ 0.7
NME8Q8N427 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NME8Q8N427 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 SIRPAP1-201ENST00000448467 1770 ntBASIC19.44■□□□□ 0.7
NME8Q8N427 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NME8Q8N427 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NME8Q8N427 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 AP002414.3-201ENST00000589352 1468 ntBASIC19.43■□□□□ 0.7
NME8Q8N427 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.43■□□□□ 0.7
NME8Q8N427 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NME8Q8N427 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.43■□□□□ 0.7
NME8Q8N427 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.43■□□□□ 0.7
NME8Q8N427 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.43■□□□□ 0.7
NME8Q8N427 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.43■□□□□ 0.7
NME8Q8N427 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.43■□□□□ 0.7
NME8Q8N427 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 KRT18P27-201ENST00000427733 1299 ntBASIC19.43■□□□□ 0.7
NME8Q8N427 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.43■□□□□ 0.7
NME8Q8N427 DDX43P3-201ENST00000441064 443 ntBASIC19.43■□□□□ 0.7
NME8Q8N427 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.43■□□□□ 0.7
NME8Q8N427 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.43■□□□□ 0.7
NME8Q8N427 UNC93B6-202ENST00000528242 690 ntBASIC19.43■□□□□ 0.7
NME8Q8N427 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NME8Q8N427 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NME8Q8N427 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.43■□□□□ 0.7
NME8Q8N427 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NME8Q8N427 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.43■□□□□ 0.7
NME8Q8N427 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.43■□□□□ 0.7
NME8Q8N427 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NME8Q8N427 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.42■□□□□ 0.7
NME8Q8N427 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NME8Q8N427 BX276092.7-203ENST00000637198 1536 ntBASIC19.42■□□□□ 0.7
NME8Q8N427 AC135776.1-201ENST00000319817 2481 ntBASIC19.42■□□□□ 0.7
NME8Q8N427 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
NME8Q8N427 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms