Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 RNF126P1-202ENST00000569893 925 ntBASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC83Q8IWF9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 SPDYE13P-201ENST00000445314 798 ntBASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 MTCL1P1-201ENST00000446207 792 ntBASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 AC104076.2-201ENST00000448912 469 ntBASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 HOMER2P1-201ENST00000455653 964 ntBASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 AC068472.1-201ENST00000474589 881 ntBASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 AC005332.3-201ENST00000589904 676 ntBASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC83Q8IWF9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 LINC01311-201ENST00000565162 1445 ntBASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC83Q8IWF9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 AL390719.2-201ENST00000606993 987 ntBASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC83Q8IWF9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms