Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.3■□□□□ 0.52
CCDC25Q86WR0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 AC026471.5-201ENST00000615068 467 ntBASIC18.3■□□□□ 0.52
CCDC25Q86WR0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 AC009949.1-201ENST00000623048 1830 ntBASIC18.3■□□□□ 0.52
CCDC25Q86WR0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC25Q86WR0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 BX088651.1-201ENST00000540551 451 ntBASIC18.29■□□□□ 0.52
CCDC25Q86WR0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 AP001412.1-201ENST00000608405 714 ntBASIC18.29■□□□□ 0.52
CCDC25Q86WR0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 AL049637.2-201ENST00000641778 930 ntBASIC18.29■□□□□ 0.52
CCDC25Q86WR0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC25Q86WR0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 AL118508.1-201ENST00000613502 2345 ntBASIC18.28■□□□□ 0.52
CCDC25Q86WR0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 CCR12P-201ENST00000446203 998 ntBASIC18.28■□□□□ 0.52
CCDC25Q86WR0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 AC142381.4-202ENST00000563973 229 ntBASIC18.28■□□□□ 0.52
CCDC25Q86WR0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC25Q86WR0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms